The draft genome sequence of Clostridium sp. strain LJ4 with high furan and phenolic derivates’ tolerances occurring from lignocellulosic hydrolysates

Jie Liu; Yujia Jiang; Tianpeng Chen; Weiliang Dong; Wenming Zhang; Jiangfeng Ma; Min Jiang; Fengxue Xin

doi:10.1007/s13205-018-1430-9

The draft genome sequence of Clostridium sp. strain LJ4 with high furan and phenolic derivates’ tolerances occurring from lignocellulosic hydrolysates

Jie Liu, Yujia Jiang, Tianpeng Chen, Weiliang Dong, Wenming Zhang, Jiangfeng Ma, Min Jiang, Fengxue Xin

COLLEGE OF BIOTECHNOLOGY AND PHARMACEUTICAL ENGINEERING

Nanjing Tech University

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Abstract

The genome of a wild-type solventogenic Clostridium sp. strain LJ4 that could directly convert undetoxified lignocellulosic hydrolysate to butanol and tolerate high concentration of furan and phenolic derivates occurring in the lignocellulosic hydrolysate is described. 16S rDNA gene sequencing and analysis indicated that it is closely related to Clostridium acetobutylicum. The genome size of strain LJ4 is 3.90 Mp, which has a G + C content of 30.72% and encodes 2711 proteins. It also has one 0.19 Mp plasmid with 181 predicted encoding proteins. Alcohol dehydrogenases (ADs) and a nicotinamide adenine dinucleotide phosphate (NADPH)-dependent flavin mononucleotide (FMN) reductase were identified, which may play key roles in inhibitors’ resistance in lignocellulosic hydrolysate.

Original language	English
Article number	406
Journal	3 Biotech
Volume	8
Issue number	10
DOIs	https://doi.org/10.1007/s13205-018-1430-9
State	Published - 1 Oct 2018

Keywords

Alcohol dehydrogenases
Clostridium
Draft genome sequencing
Furan and phenolic derivates
NADPH-dependent FMN reductase

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10.1007/s13205-018-1430-9

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title = "The draft genome sequence of Clostridium sp. strain LJ4 with high furan and phenolic derivates{\textquoteright} tolerances occurring from lignocellulosic hydrolysates",

abstract = "The genome of a wild-type solventogenic Clostridium sp. strain LJ4 that could directly convert undetoxified lignocellulosic hydrolysate to butanol and tolerate high concentration of furan and phenolic derivates occurring in the lignocellulosic hydrolysate is described. 16S rDNA gene sequencing and analysis indicated that it is closely related to Clostridium acetobutylicum. The genome size of strain LJ4 is 3.90 Mp, which has a G + C content of 30.72% and encodes 2711 proteins. It also has one 0.19 Mp plasmid with 181 predicted encoding proteins. Alcohol dehydrogenases (ADs) and a nicotinamide adenine dinucleotide phosphate (NADPH)-dependent flavin mononucleotide (FMN) reductase were identified, which may play key roles in inhibitors{\textquoteright} resistance in lignocellulosic hydrolysate.",

keywords = "Alcohol dehydrogenases, Clostridium, Draft genome sequencing, Furan and phenolic derivates, NADPH-dependent FMN reductase",

author = "Jie Liu and Yujia Jiang and Tianpeng Chen and Weiliang Dong and Wenming Zhang and Jiangfeng Ma and Min Jiang and Fengxue Xin",

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AU - Liu, Jie

AU - Jiang, Yujia

AU - Chen, Tianpeng

AU - Dong, Weiliang

AU - Zhang, Wenming

AU - Ma, Jiangfeng

AU - Jiang, Min

AU - Xin, Fengxue

PY - 2018/10/1

Y1 - 2018/10/1

N2 - The genome of a wild-type solventogenic Clostridium sp. strain LJ4 that could directly convert undetoxified lignocellulosic hydrolysate to butanol and tolerate high concentration of furan and phenolic derivates occurring in the lignocellulosic hydrolysate is described. 16S rDNA gene sequencing and analysis indicated that it is closely related to Clostridium acetobutylicum. The genome size of strain LJ4 is 3.90 Mp, which has a G + C content of 30.72% and encodes 2711 proteins. It also has one 0.19 Mp plasmid with 181 predicted encoding proteins. Alcohol dehydrogenases (ADs) and a nicotinamide adenine dinucleotide phosphate (NADPH)-dependent flavin mononucleotide (FMN) reductase were identified, which may play key roles in inhibitors’ resistance in lignocellulosic hydrolysate.

AB - The genome of a wild-type solventogenic Clostridium sp. strain LJ4 that could directly convert undetoxified lignocellulosic hydrolysate to butanol and tolerate high concentration of furan and phenolic derivates occurring in the lignocellulosic hydrolysate is described. 16S rDNA gene sequencing and analysis indicated that it is closely related to Clostridium acetobutylicum. The genome size of strain LJ4 is 3.90 Mp, which has a G + C content of 30.72% and encodes 2711 proteins. It also has one 0.19 Mp plasmid with 181 predicted encoding proteins. Alcohol dehydrogenases (ADs) and a nicotinamide adenine dinucleotide phosphate (NADPH)-dependent flavin mononucleotide (FMN) reductase were identified, which may play key roles in inhibitors’ resistance in lignocellulosic hydrolysate.

KW - Alcohol dehydrogenases

KW - Clostridium

KW - Draft genome sequencing

KW - Furan and phenolic derivates

KW - NADPH-dependent FMN reductase

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ER -

The draft genome sequence of Clostridium sp. strain LJ4 with high furan and phenolic derivates’ tolerances occurring from lignocellulosic hydrolysates

Abstract

Keywords

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