TY - JOUR
T1 - Unusual depolymerization mechanism of Poly(ethylene terephthalate) by hydrolase 202
AU - Wang, Ningru
AU - Li, Yanwei
AU - Zheng, Mingna
AU - Dong, Weiliang
AU - Zhang, Qingzhu
AU - Wang, Wenxing
N1 - Publisher Copyright:
© 2025 Elsevier Ltd
PY - 2025/3
Y1 - 2025/3
N2 - Polyethylene terephthalate (PET) waste significantly contributes to the global plastic crisis, but enzymatic conversion has become an efficient and environmentally friendly strategy to combat it. Therefore, this study explored the Re-face selective depolymerization mechanisms of a novel PET-degradation peptidase, hydrolase 202. Theoretical calculations revealed that the first step, a catalytic triad-assisted nucleophilic attack, is the rate-determining step. The corresponding Boltzmann-weighted average barrier was 21.6 kcal/mol. Furthermore, hydrolase 202 degraded Re-face PET more effectively than FAST-PETase, whereas other reported PET hydrolases (e.g., FAST-PETase) degraded Si-face PET more effectively. The hydrogen bond network significantly influenced the depolymerization efficiency. We also identified correlations between 24 important structural and charge features and energy barriers. Key charge, distance, and angle features were responsible for the superiority of the Re-face depolymerization. Finally, we identified residues that may affect the depolymerization efficiency of hydrolase 202, such as Glu215. These findings offer new insights into the potential engineering of PETases and may enhance enzymatic PET waste recycling.
AB - Polyethylene terephthalate (PET) waste significantly contributes to the global plastic crisis, but enzymatic conversion has become an efficient and environmentally friendly strategy to combat it. Therefore, this study explored the Re-face selective depolymerization mechanisms of a novel PET-degradation peptidase, hydrolase 202. Theoretical calculations revealed that the first step, a catalytic triad-assisted nucleophilic attack, is the rate-determining step. The corresponding Boltzmann-weighted average barrier was 21.6 kcal/mol. Furthermore, hydrolase 202 degraded Re-face PET more effectively than FAST-PETase, whereas other reported PET hydrolases (e.g., FAST-PETase) degraded Si-face PET more effectively. The hydrogen bond network significantly influenced the depolymerization efficiency. We also identified correlations between 24 important structural and charge features and energy barriers. Key charge, distance, and angle features were responsible for the superiority of the Re-face depolymerization. Finally, we identified residues that may affect the depolymerization efficiency of hydrolase 202, such as Glu215. These findings offer new insights into the potential engineering of PETases and may enhance enzymatic PET waste recycling.
KW - Depolymerase
KW - Depolymerization
KW - Polyethylene terephthalate
KW - Quantum mechanics/molecular mechanics
UR - http://www.scopus.com/inward/record.url?scp=85214811876&partnerID=8YFLogxK
U2 - 10.1016/j.chemosphere.2025.144108
DO - 10.1016/j.chemosphere.2025.144108
M3 - 文章
AN - SCOPUS:85214811876
SN - 0045-6535
VL - 372
JO - Chemosphere
JF - Chemosphere
M1 - 144108
ER -