TY - JOUR
T1 - Draft genome sequence of Bacillus sp. M13(2017), a multidrug-resistant subclass B1 blaNDM-producing, spore-forming bacterium isolated from China
AU - Liu, Tingting
AU - Zhu, Liying
AU - Zhang, Zhidong
AU - Jiang, Ling
AU - Huang, He
N1 - Publisher Copyright:
© 2018 International Society for Chemotherapy of Infection and Cancer
PY - 2018/9
Y1 - 2018/9
N2 - Objectives: Bacillus spp., which have relevance to pseudo-epidemics in clinics, may cause serious infections as well as high morbidity and mortality in hospitalised patients with haematological malignancies. Here we report the isolation of Bacillus sp. M13(2017) with a multidrug-resistant phenotype and spore-producing structures, a new strain isolated from radiation-polluted soil in Xinjiang Uyghur Autonomous Region, China. Methods: The draft genome of Bacillus sp. M13(2017) was obtained using an Illumina HiSeq TM 2000 next-generation DNA sequencing platform. Subsequently, clean sequencing data were assembled using SOAPdenovo and were optimised using GapCloser. Results: The draft genome sequence of Bacillus sp. M13(2017) includes 5 873 661 bp, a GC content of 34.84% and is assembled into 6108 open reading frames, of which ca. 5.08% and 1.76% are related to spore formation and antimicrobial resistance, respectively. The blaNDM gene encoding a subclass B1 metallo-β-lactamase was also discovered in this isolate. Conclusions: The genome sequence of Bacillus sp. M13(2017) reported here will be a reference for comparative analysis with genomic and clinically important multidrug resistance features of Bacillus sp.
AB - Objectives: Bacillus spp., which have relevance to pseudo-epidemics in clinics, may cause serious infections as well as high morbidity and mortality in hospitalised patients with haematological malignancies. Here we report the isolation of Bacillus sp. M13(2017) with a multidrug-resistant phenotype and spore-producing structures, a new strain isolated from radiation-polluted soil in Xinjiang Uyghur Autonomous Region, China. Methods: The draft genome of Bacillus sp. M13(2017) was obtained using an Illumina HiSeq TM 2000 next-generation DNA sequencing platform. Subsequently, clean sequencing data were assembled using SOAPdenovo and were optimised using GapCloser. Results: The draft genome sequence of Bacillus sp. M13(2017) includes 5 873 661 bp, a GC content of 34.84% and is assembled into 6108 open reading frames, of which ca. 5.08% and 1.76% are related to spore formation and antimicrobial resistance, respectively. The blaNDM gene encoding a subclass B1 metallo-β-lactamase was also discovered in this isolate. Conclusions: The genome sequence of Bacillus sp. M13(2017) reported here will be a reference for comparative analysis with genomic and clinically important multidrug resistance features of Bacillus sp.
KW - Bacillus sp.
KW - Infection
KW - Multidrug resistance
KW - WGS
KW - Whole-genome sequencing
UR - http://www.scopus.com/inward/record.url?scp=85050075939&partnerID=8YFLogxK
U2 - 10.1016/j.jgar.2018.07.002
DO - 10.1016/j.jgar.2018.07.002
M3 - 评论/辩论
C2 - 30017730
AN - SCOPUS:85050075939
SN - 2213-7165
VL - 14
SP - 152
EP - 153
JO - Journal of Global Antimicrobial Resistance
JF - Journal of Global Antimicrobial Resistance
ER -