TY - JOUR
T1 - Draft genome sequence of broad-spectrum antifungal-producing Bacillus velezensis C4341 isolated from a saline-alkali soil sample in China
AU - Zhu, Liying
AU - Liu, Nian
AU - Wang, Haoqi
AU - Zhang, Zhidong
AU - Jiang, Ling
AU - Huang, He
N1 - Publisher Copyright:
© 2019 International Society for Chemotherapy of Infection and Cancer
PY - 2019/3
Y1 - 2019/3
N2 - Objectives: Bacterial micro-organisms from the genus Bacillus have a broad spectrum of antimicrobial activity against plant pathogenic bacteria, fungi and viruses. Bacillus velezensis has been extensively used as a biocontrol agent in the agricultural field. In the present study, B. velezensis strain C4341 was isolated from saline-alkali soil in Xinjiang, China, producing a wide range of antifungal compounds of different structures. Methods: The whole genome of B. velezensis C4341 was sequenced using an Illumina HiSeq™ 2000 sequencing system, was assembled using SOAPdenovo and was optimised with GapCloser. Results: The genome size of strain C4341 was calculated at 3 963 750 bp with a G+C content of 46.4%. The whole genome was assembled into 4019 open reading frames (ORFs), of which 5.9% and 1.6% were related to antagonistic secondary metabolites and antimicrobial resistance, respectively. Conclusion: The whole genome sequence of B. velezensis C4341 will be beneficial in comparative analysis of the genus Bacillus and shows future prospects in antifungal application for sustainable agriculture.
AB - Objectives: Bacterial micro-organisms from the genus Bacillus have a broad spectrum of antimicrobial activity against plant pathogenic bacteria, fungi and viruses. Bacillus velezensis has been extensively used as a biocontrol agent in the agricultural field. In the present study, B. velezensis strain C4341 was isolated from saline-alkali soil in Xinjiang, China, producing a wide range of antifungal compounds of different structures. Methods: The whole genome of B. velezensis C4341 was sequenced using an Illumina HiSeq™ 2000 sequencing system, was assembled using SOAPdenovo and was optimised with GapCloser. Results: The genome size of strain C4341 was calculated at 3 963 750 bp with a G+C content of 46.4%. The whole genome was assembled into 4019 open reading frames (ORFs), of which 5.9% and 1.6% were related to antagonistic secondary metabolites and antimicrobial resistance, respectively. Conclusion: The whole genome sequence of B. velezensis C4341 will be beneficial in comparative analysis of the genus Bacillus and shows future prospects in antifungal application for sustainable agriculture.
KW - Antagonistic activity
KW - Bacillus velezensis
KW - Multidrug resistance
KW - Secondary metabolites
KW - Whole-genome sequencing
UR - http://www.scopus.com/inward/record.url?scp=85062521056&partnerID=8YFLogxK
U2 - 10.1016/j.jgar.2018.12.019
DO - 10.1016/j.jgar.2018.12.019
M3 - 评论/辩论
C2 - 30802554
AN - SCOPUS:85062521056
SN - 2213-7165
VL - 16
SP - 291
EP - 293
JO - Journal of Global Antimicrobial Resistance
JF - Journal of Global Antimicrobial Resistance
ER -